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Chip seq from flashfrozen cells
Chip seq from flashfrozen cells










chip seq from flashfrozen cells

chip seq from flashfrozen cells

Robinson JT, Thorvaldsdóttir H, Winckler W et al (2011) Integrative genomics viewer.

Chip seq from flashfrozen cells software#

Nakato R, Itoh T, Shirahige K (2013) DROMPA: easy-to-handle peak calling and visualization software for the computational analysis and validation of ChIP-seq data. Langmead B, Trapnell C, Pop M, Salzberg SL (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Poorey K, Viswanathan R, Carver MN et al (2013) Measuring chromatin interaction dynamics on the second time scale at single-copy genes. Gerlich D, Hirota T, Koch B et al (2006) Condensin I stabilizes chromosomes mechanically through a dynamic interaction in live cells. Kidder BL, Hu G, Zhao K (2011) ChIP-Seq: technical considerations for obtaining high-quality data. The series of methods in molecular biology, vol 1164. In: Miyamoto-Sato E, Ohashi H, Sasaki H et al (eds) Transcription factor regulatory networks. Komata M, Katou Y, Tanaka H et al (2014) Chromatin Immunoprecipitation Protocol for Mammalian Cells. Sutani T, Sakata T, Nakato R et al (2015) Condensin targets and reduces unwound DNA structures associated with transcription in mitotic chromosome condensation. Schmidt D, Schwalie PC, Ross-Innes CS et al (2010) A CTCF-independent role for cohesin in tissue-specific transcription. Kagey MH, Newman JJ, Bilodeau S et al (2011) Mediator and cohesin connect gene expression and chromatin architecture. Nat Rev Genet 10:669–680ĭeardorff MA, Bando M, Nakato R et al (2012) HDAC8 mutations in Cornelia de Lange syndrome affect the cohesin acetylation cycle. Park PJ (2009) ChIP-seq: advantages and challenges of a maturing technology.












Chip seq from flashfrozen cells